Type: Package
Package: PKbioanalysis
Title: Pharmacokinetic Bioanalysis Experiments Design and Exploration
Version: 0.4.0
Authors@R: c(
    person("Omar", "Elashkar", email = "omar.i.elashkar@gmail.com", 
      role = c("aut", "cre"), comment = c(ORCID = "0000-0002-5505-778X"))
      )
Maintainer: Omar Elashkar <omar.i.elashkar@gmail.com>
Description: Automate pharmacokinetic/pharmacodynamic bioanalytical procedures based on best practices and regulatory recommendations.
    The package impose regulatory constrains and sanity checking for common bioanalytical procedures. 
    Additionally, 'PKbioanalysis' provides a relational infrastructure for plate management and injection sequence.
License: AGPL (>= 3)
Encoding: UTF-8
RoxygenNote: 7.3.3
Depends: R (>= 4.3.0)
Imports: dplyr, tidyselect, stringr (>= 1.5.1), ggplot2 (>= 3.5.1),
        ggforce (>= 0.4.1), tidyr, glue (>= 1.6.2), checkmate, shiny,
        DBI, duckdb (>= 1.0.0), bslib, bsicons, cli, DiagrammeR, DT,
        shinyWidgets, shinyjs, units, stats, shinyalert, htmltools,
        rlang, grDevices, utils, yaml, rhandsontable, methods,
        reticulate, RTMB, janitor, tibble, xml2, RaMS, data.tree,
        nloptr, forcats, ggiraph, gt, plotly, pracma, reactable,
        gtools, ellmer, htmlwidgets, jsonlite, nlme, pmxTools, scales,
        shinychat, uuid, sortable
Suggests: rxode2, knitr, patchwork, rmarkdown, testthat (>= 3.0.0)
SystemRequirements: python (>= 3.10)
URL: https://omarashkar.github.io/PKbioanalysis/
BugReports: https://github.com/OmarAshkar/PKbioanalysis/issues
Config/testthat/edition: 3
Collate: 'PKbioanalysis-package.R' 'calc.R' 'chrom_anomaly_plots.R'
        'chrom_app.R' 'chrom_parsers.R' 'chrom_utils.R' 'generics.R'
        'class.R' 'chromatogram.R' 'config.R' 'dil_map.R'
        'estim_residuals.R' 'genAI.R' 'gen_studydesign.R'
        'generate_test_set.R' 'injec_list.R' 'linearitycheck.R'
        'method_file.R' 'peak_integerate.R' 'plate.R' 'plate_expr.R'
        'plates_class.R' 'process_chroms.R' 'quant_app.R'
        'quant_misc.R' 'quant_object.R' 'quant_parsers.R'
        'samples_profiles.R' 'study_app.R' 'suitability_utils.R'
        'utils.R' 'writers.R' 'zzz.R'
NeedsCompilation: no
Packaged: 2026-01-14 20:02:19 UTC; omar.elashkar
Author: Omar Elashkar [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-5505-778X>)
Repository: CRAN
Date/Publication: 2026-01-14 20:40:07 UTC
Built: R 4.4.3; ; 2026-01-14 21:27:38 UTC; unix
