# Applying Landscape Genomic Methods on 'SNP' and 'Silicodart' Data

## Documentation for package ‘dartR.spatial’ version 1.0.3

- DESCRIPTION file.

## Help Pages

gl.costdistances | Calculates cost distances for a given landscape (resistance matrix)
gl.genleastcost | Performs least-cost path analysis based on a friction matrix
gl.grm2 | Calculates an identity by descent matrix
gl.ibd | Performs isolation by distance analysis
gl.kosman | Calculates a Kosman distance matrix for each pair of individuals
gl.run.eems | Runs the EEMS algorithm (Estimating Effective Migration Surfaces) on a genlight object.
gl.spatial.autoCorr | Spatial autocorrelation following Smouse and Peakall 1999
gl2shp | Converts a genlight object to ESRI shapefiles or kml files
utils.spautocor | Spatial autocorrelation coefficient calculations